Detailed information of SNP:



SNP ID: sf0816289390(Gbrowse)

Chromosome: chr08

Position: 16289390
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1366 92.39% 7.61%
All Indica769 89.08% 10.92%
All Japonica483 96.89% 3.11%
Aus61 93.44% 6.56%
Indica I357 94.40% 5.60%
Indica II208 89.90% 10.10%
Indica Intermediate204 78.92% 21.08%
Temperate Japonica326 99.39% 0.61%
Tropical Japonica91 90.11% 9.89%
Japonica Intermediate66 93.94% 6.06%
Group VI/Aromatic13 100.00% 0.00%
Intermediate40 97.50% 2.50%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0816289390 A->G INTERGENIC None