Detailed information of SNP:



SNP ID: sf0817170627(Gbrowse)

Chromosome: chr08

Position: 17170627
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 97.11% 2.89%
All Indica799 99.12% 0.88%
All Japonica497 93.76% 6.24%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 97.65% 2.35%
Indica Intermediate211 99.05% 0.95%
Temperate Japonica335 99.10% 0.90%
Tropical Japonica94 73.40% 26.60%
Japonica Intermediate68 95.59% 4.41%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 92.86% 7.14%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0817170627 G->A INTERGENIC None