Detailed information of SNP:
SNP ID:
sf0817170627(Gbrowse)
Chromosome: chr08 Position: 17170627 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1419 | 97.11% | 2.89% |
All Indica | 799 | 99.12% | 0.88% |
All Japonica | 497 | 93.76% | 6.24% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 100.00% | 0.00% |
Indica II | 213 | 97.65% | 2.35% |
Indica Intermediate | 211 | 99.05% | 0.95% |
Temperate Japonica | 335 | 99.10% | 0.90% |
Tropical Japonica | 94 | 73.40% | 26.60% |
Japonica Intermediate | 68 | 95.59% | 4.41% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 92.86% | 7.14% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0817170627 | G->A | INTERGENIC | None |