Detailed information of SNP:
|
SNP ID:
sf0817356008(Gbrowse)
Chromosome: chr08 Position: 17356008 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1408 | 93.18% | 6.82% |
| All Indica | 788 | 94.29% | 5.71% |
| All Japonica | 497 | 95.17% | 4.83% |
| Aus | 67 | 64.18% | 35.82% |
| Indica I | 371 | 94.88% | 5.12% |
| Indica II | 210 | 92.38% | 7.62% |
| Indica Intermediate | 207 | 95.17% | 4.83% |
| Temperate Japonica | 335 | 92.84% | 7.16% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 92.86% | 7.14% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0817356008 | A->G | INTERGENIC | None |