Detailed information of SNP:
|
SNP ID:
sf0818198022(Gbrowse)
Chromosome: chr08 Position: 18198022 |
Major allele:
C
Minor allele: A Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of C(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1407 | 96.16% | 3.84% |
| All Indica | 792 | 99.87% | 0.13% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 62 | 25.81% | 74.19% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 206 | 99.51% | 0.49% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 83.33% | 16.67% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0818198022 | C->A | INTERGENIC | None |