Detailed information of SNP:
|
SNP ID:
sf0818207305(Gbrowse)
Chromosome: chr08 Position: 18207305 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1419 | 63.57% | 36.43% |
| All Indica | 799 | 90.61% | 9.39% |
| All Japonica | 497 | 26.76% | 73.24% |
| Aus | 67 | 13.43% | 86.57% |
| Indica I | 375 | 89.87% | 10.13% |
| Indica II | 213 | 91.08% | 8.92% |
| Indica Intermediate | 211 | 91.47% | 8.53% |
| Temperate Japonica | 335 | 20.00% | 80.00% |
| Tropical Japonica | 94 | 38.30% | 61.70% |
| Japonica Intermediate | 68 | 44.12% | 55.88% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 54.76% | 45.24% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0818207305 | A->G | INTERGENIC | None |