Detailed information of SNP:
SNP ID:
sf0818215295(Gbrowse)
Chromosome: chr08 Position: 18215295 |
Major allele:
A
Minor allele: T Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of A(major allele) | Frequency of T(minor allele) |
---|---|---|---|
All | 1419 | 93.59% | 6.41% |
All Indica | 799 | 97.00% | 3.00% |
All Japonica | 497 | 100.00% | 0.00% |
Aus | 67 | 13.43% | 86.57% |
Indica I | 375 | 100.00% | 0.00% |
Indica II | 213 | 90.61% | 9.39% |
Indica Intermediate | 211 | 98.10% | 1.90% |
Temperate Japonica | 335 | 100.00% | 0.00% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 78.57% | 21.43% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0818215295 | A->T | INTERGENIC | None |