Detailed information of SNP:
|
SNP ID:
sf0818316275(Gbrowse)
Chromosome: chr08 Position: 18316275 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1407 | 96.52% | 3.48% |
| All Indica | 795 | 98.24% | 1.76% |
| All Japonica | 490 | 99.39% | 0.61% |
| Aus | 67 | 58.21% | 41.79% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 210 | 93.33% | 6.67% |
| Indica Intermediate | 210 | 100.00% | 0.00% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 61 | 96.72% | 3.28% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 90.24% | 9.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0818316275 | G->A | INTERGENIC | None |