Detailed information of SNP:
|
SNP ID:
sf0818418608(Gbrowse)
Chromosome: chr08 Position: 18418608 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1410 | 96.81% | 3.19% |
| All Indica | 791 | 97.22% | 2.78% |
| All Japonica | 496 | 95.56% | 4.44% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 368 | 96.20% | 3.80% |
| Indica II | 213 | 98.12% | 1.88% |
| Indica Intermediate | 210 | 98.10% | 1.90% |
| Temperate Japonica | 335 | 98.21% | 1.79% |
| Tropical Japonica | 93 | 88.17% | 11.83% |
| Japonica Intermediate | 68 | 92.65% | 7.35% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0818418608 | A->G | INTERGENIC | None |