Detailed information of SNP:
|
SNP ID:
sf0818654942(Gbrowse)
Chromosome: chr08 Position: 18654942 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 73.06% | 26.94% |
| All Indica | 798 | 57.14% | 42.86% |
| All Japonica | 497 | 99.80% | 0.20% |
| Aus | 67 | 55.22% | 44.78% |
| Indica I | 375 | 57.87% | 42.13% |
| Indica II | 212 | 81.60% | 18.40% |
| Indica Intermediate | 211 | 31.28% | 68.72% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 78.57% | 21.43% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0818654942 | G->A | INTERGENIC | None |