Detailed information of SNP:
|
SNP ID:
sf0818681910(Gbrowse)
Chromosome: chr08 Position: 18681910 |
Major allele:
T
Minor allele: A Reference allele: T |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of T(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1407 | 90.48% | 9.52% |
| All Indica | 795 | 86.67% | 13.33% |
| All Japonica | 490 | 94.49% | 5.51% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 96.53% | 3.47% |
| Indica II | 212 | 91.51% | 8.49% |
| Indica Intermediate | 208 | 63.94% | 36.06% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 87 | 73.56% | 26.44% |
| Japonica Intermediate | 68 | 94.12% | 5.88% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0818681910 | T->A | INTERGENIC | None |