Detailed information of SNP:
|
SNP ID:
sf0818724763(Gbrowse)
Chromosome: chr08 Position: 18724763 |
Major allele:
C
Minor allele: G Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of C(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1416 | 93.71% | 6.29% |
| All Indica | 797 | 91.97% | 8.03% |
| All Japonica | 496 | 95.16% | 4.84% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 374 | 98.13% | 1.87% |
| Indica II | 213 | 95.31% | 4.69% |
| Indica Intermediate | 210 | 77.62% | 22.38% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 93 | 77.42% | 22.58% |
| Japonica Intermediate | 68 | 95.59% | 4.41% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0818724763 | C->G | INTERGENIC | None |