Detailed information of SNP:
|
SNP ID:
sf0818818198(Gbrowse)
Chromosome: chr08 Position: 18818198 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1360 | 95.15% | 4.85% |
| All Indica | 757 | 97.23% | 2.77% |
| All Japonica | 481 | 97.30% | 2.70% |
| Aus | 67 | 53.73% | 46.27% |
| Indica I | 369 | 98.92% | 1.08% |
| Indica II | 206 | 96.12% | 3.88% |
| Indica Intermediate | 182 | 95.05% | 4.95% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 80 | 86.25% | 13.75% |
| Japonica Intermediate | 66 | 96.97% | 3.03% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0818818198 | A->G | INTERGENIC | None |