Detailed information of SNP:
|
SNP ID:
sf0819014053(Gbrowse)
Chromosome: chr08 Position: 19014053 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1412 | 89.66% | 10.34% |
| All Indica | 794 | 85.89% | 14.11% |
| All Japonica | 495 | 93.74% | 6.26% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 373 | 94.91% | 5.09% |
| Indica II | 212 | 91.98% | 8.02% |
| Indica Intermediate | 209 | 63.64% | 36.36% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 92 | 70.65% | 29.35% |
| Japonica Intermediate | 68 | 94.12% | 5.88% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 92.86% | 7.14% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0819014053 | G->A | INTERGENIC | None |