Detailed information of SNP:
|
SNP ID:
sf0819066026(Gbrowse)
Chromosome: chr08 Position: 19066026 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1383 | 97.69% | 2.31% |
| All Indica | 769 | 96.23% | 3.77% |
| All Japonica | 497 | 99.80% | 0.20% |
| Aus | 61 | 96.72% | 3.28% |
| Indica I | 355 | 97.18% | 2.82% |
| Indica II | 210 | 93.81% | 6.19% |
| Indica Intermediate | 204 | 97.06% | 2.94% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0819066026 | G->A | INTERGENIC | None |