Detailed information of SNP:
|
SNP ID:
sf0819355803(Gbrowse)
Chromosome: chr08 Position: 19355803 |
Major allele:
C
Minor allele: G Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of C(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1417 | 97.04% | 2.96% |
| All Indica | 798 | 95.86% | 4.14% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 66 | 87.88% | 12.12% |
| Indica I | 375 | 97.07% | 2.93% |
| Indica II | 213 | 97.18% | 2.82% |
| Indica Intermediate | 210 | 92.38% | 7.62% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0819355803 | C->G | INTERGENIC | None |