Detailed information of SNP:
|
SNP ID:
sf0819424283(Gbrowse)
Chromosome: chr08 Position: 19424283 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1401 | 91.72% | 8.28% |
| All Indica | 783 | 90.04% | 9.96% |
| All Japonica | 497 | 99.80% | 0.20% |
| Aus | 67 | 44.78% | 55.22% |
| Indica I | 365 | 83.56% | 16.44% |
| Indica II | 209 | 95.22% | 4.78% |
| Indica Intermediate | 209 | 96.17% | 3.83% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0819424283 | A->G | INTERGENIC | None |