Detailed information of SNP:



SNP ID: sf0819583252(Gbrowse)

Chromosome: chr08

Position: 19583252
Major allele: G

Minor allele: T

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of T(minor allele)
All1419 72.45% 27.55%
All Indica799 99.25% 0.75%
All Japonica497 28.77% 71.23%
Aus67 86.57% 13.43%
Indica I375 98.93% 1.07%
Indica II213 99.53% 0.47%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica335 23.58% 76.42%
Tropical Japonica94 19.15% 80.85%
Japonica Intermediate68 67.65% 32.35%
Group VI/Aromatic14 64.29% 35.71%
Intermediate42 59.52% 40.48%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0819583252 T->G INTERGENIC None