Detailed information of SNP:
|
SNP ID:
sf0819870410(Gbrowse)
Chromosome: chr08 Position: 19870410 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1416 | 92.58% | 7.42% |
| All Indica | 796 | 87.94% | 12.06% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 86.57% | 13.43% |
| Indica I | 374 | 85.83% | 14.17% |
| Indica II | 213 | 99.53% | 0.47% |
| Indica Intermediate | 209 | 79.90% | 20.10% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0819870410 | G->A | INTERGENIC | None |