Detailed information of SNP:



SNP ID: sf0819996061(Gbrowse)

Chromosome: chr08

Position: 19996061
Major allele: C

Minor allele: G

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of G(minor allele)
All1419 84.50% 15.50%
All Indica799 99.62% 0.38%
All Japonica497 57.34% 42.66%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 99.06% 0.94%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica335 48.36% 51.64%
Tropical Japonica94 90.43% 9.57%
Japonica Intermediate68 55.88% 44.12%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 88.10% 11.90%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0819996061 G->C INTERGENIC None