Detailed information of SNP:
SNP ID:
sf0820845276(Gbrowse)
Chromosome: chr08 Position: 20845276 |
Major allele:
G
Minor allele: T Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of T(minor allele) |
---|---|---|---|
All | 1417 | 94.78% | 5.22% |
All Indica | 797 | 90.84% | 9.16% |
All Japonica | 497 | 99.80% | 0.20% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 96.80% | 3.20% |
Indica II | 211 | 90.52% | 9.48% |
Indica Intermediate | 211 | 80.57% | 19.43% |
Temperate Japonica | 335 | 99.70% | 0.30% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0820845276 | G->T | INTERGENIC | None |