Detailed information of SNP:



SNP ID: sf0820845276(Gbrowse)

Chromosome: chr08

Position: 20845276
Major allele: G

Minor allele: T

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of T(minor allele)
All1417 94.78% 5.22%
All Indica797 90.84% 9.16%
All Japonica497 99.80% 0.20%
Aus67 100.00% 0.00%
Indica I375 96.80% 3.20%
Indica II211 90.52% 9.48%
Indica Intermediate211 80.57% 19.43%
Temperate Japonica335 99.70% 0.30%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0820845276 G->T INTERGENIC None