Detailed information of SNP:
SNP ID:
sf0821268415(Gbrowse)
Chromosome: chr08 Position: 21268415 |
Major allele:
T
Minor allele: C Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of T(major allele) | Frequency of C(minor allele) |
---|---|---|---|
All | 1371 | 96.13% | 3.87% |
All Indica | 798 | 100.00% | 0.00% |
All Japonica | 450 | 88.44% | 11.56% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 100.00% | 0.00% |
Indica II | 212 | 100.00% | 0.00% |
Indica Intermediate | 211 | 100.00% | 0.00% |
Temperate Japonica | 290 | 82.07% | 17.93% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 66 | 100.00% | 0.00% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0821268415 | C->T | INTERGENIC | None |