Detailed information of SNP:
|
SNP ID:
sf0821684181(Gbrowse)
Chromosome: chr08 Position: 21684181 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 63.33% | 36.67% |
| All Indica | 798 | 97.12% | 2.88% |
| All Japonica | 497 | 4.02% | 95.98% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 374 | 96.79% | 3.21% |
| Indica II | 213 | 97.18% | 2.82% |
| Indica Intermediate | 211 | 97.63% | 2.37% |
| Temperate Japonica | 335 | 0.60% | 99.40% |
| Tropical Japonica | 94 | 9.57% | 90.43% |
| Japonica Intermediate | 68 | 13.24% | 86.76% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 57.14% | 42.86% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0821684181 | A->G | INTERGENIC | None |