Detailed information of SNP:
|
SNP ID:
sf0822153118(Gbrowse)
Chromosome: chr08 Position: 22153118 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1321 | 82.59% | 17.41% |
| All Indica | 701 | 67.33% | 32.67% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 318 | 65.41% | 34.59% |
| Indica II | 198 | 82.32% | 17.68% |
| Indica Intermediate | 185 | 54.59% | 45.41% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0822153118 | G->A | INTERGENIC | None |