Detailed information of SNP:
|
SNP ID:
sf0822264583(Gbrowse)
Chromosome: chr08 Position: 22264583 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1393 | 81.98% | 18.02% |
| All Indica | 774 | 68.73% | 31.27% |
| All Japonica | 497 | 99.40% | 0.60% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 362 | 73.76% | 26.24% |
| Indica II | 205 | 42.44% | 57.56% |
| Indica Intermediate | 207 | 85.99% | 14.01% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 94 | 98.94% | 1.06% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 85.37% | 14.63% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0822264583 | G->A | INTERGENIC | None |