Detailed information of SNP:
|
SNP ID:
sf0822835164(Gbrowse)
Chromosome: chr08 Position: 22835164 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1330 | 95.79% | 4.21% |
| All Indica | 719 | 92.49% | 7.51% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 63 | 100.00% | 0.00% |
| Indica I | 335 | 91.64% | 8.36% |
| Indica II | 200 | 96.50% | 3.50% |
| Indica Intermediate | 184 | 89.67% | 10.33% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 37 | 94.59% | 5.41% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0822835164 | G->A | INTERGENIC | None |