Detailed information of SNP:
|
SNP ID:
sf0822893333(Gbrowse)
Chromosome: chr08 Position: 22893333 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1411 | 66.76% | 33.24% |
| All Indica | 798 | 99.75% | 0.25% |
| All Japonica | 491 | 8.15% | 91.85% |
| Aus | 67 | 95.52% | 4.48% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 213 | 99.53% | 0.47% |
| Indica Intermediate | 210 | 99.52% | 0.48% |
| Temperate Japonica | 335 | 8.66% | 91.34% |
| Tropical Japonica | 89 | 6.74% | 93.26% |
| Japonica Intermediate | 67 | 7.46% | 92.54% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 68.29% | 31.71% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0822893333 | A->G | INTERGENIC | None |