Detailed information of SNP:
|
SNP ID:
sf0822951923(Gbrowse)
Chromosome: chr08 Position: 22951923 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1308 | 97.48% | 2.52% |
| All Indica | 798 | 99.87% | 0.13% |
| All Japonica | 391 | 91.82% | 8.18% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 210 | 99.52% | 0.48% |
| Temperate Japonica | 257 | 89.49% | 10.51% |
| Tropical Japonica | 79 | 100.00% | 0.00% |
| Japonica Intermediate | 55 | 90.91% | 9.09% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 38 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0822951923 | G->A | INTERGENIC | None |