Detailed information of SNP:



SNP ID: sf0824112050(Gbrowse)

Chromosome: chr08

Position: 24112050
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1417 99.15% 0.85%
All Indica799 100.00% 0.00%
All Japonica495 97.58% 2.42%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica333 100.00% 0.00%
Tropical Japonica94 87.23% 12.77%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0824112050 C->T INTERGENIC None