Detailed information of SNP:
|
SNP ID:
sf0824209896(Gbrowse)
Chromosome: chr08 Position: 24209896 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1364 | 98.83% | 1.17% |
| All Indica | 799 | 100.00% | 0.00% |
| All Japonica | 445 | 96.40% | 3.60% |
| Aus | 66 | 100.00% | 0.00% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 296 | 98.65% | 1.35% |
| Tropical Japonica | 84 | 96.43% | 3.57% |
| Japonica Intermediate | 65 | 86.15% | 13.85% |
| Group VI/Aromatic | 13 | 100.00% | 0.00% |
| Intermediate | 41 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0824209896 | G->A | INTERGENIC | None |