Detailed information of SNP:



SNP ID: sf0825096524(Gbrowse)

Chromosome: chr08

Position: 25096524
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1392 90.30% 9.70%
All Indica790 88.61% 11.39%
All Japonica497 100.00% 0.00%
Aus50 18.00% 82.00%
Indica I375 94.67% 5.33%
Indica II212 89.15% 10.85%
Indica Intermediate203 76.85% 23.15%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 90.24% 9.76%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0825096524 G->A INTERGENIC None