Detailed information of SNP:
|
SNP ID:
sf0826159061(Gbrowse)
Chromosome: chr08 Position: 26159061 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 69.11% | 30.89% |
| All Indica | 799 | 52.57% | 47.43% |
| All Japonica | 497 | 99.20% | 0.80% |
| Aus | 67 | 38.81% | 61.19% |
| Indica I | 375 | 51.20% | 48.80% |
| Indica II | 213 | 65.26% | 34.74% |
| Indica Intermediate | 211 | 42.18% | 57.82% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 98.94% | 1.06% |
| Japonica Intermediate | 68 | 97.06% | 2.94% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 41 | 68.29% | 31.71% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0826159061 | G->A | INTERGENIC | None |