Detailed information of SNP:
|
SNP ID:
sf0826573277(Gbrowse)
Chromosome: chr08 Position: 26573277 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 63.54% | 36.46% |
| All Indica | 798 | 94.99% | 5.01% |
| All Japonica | 497 | 10.06% | 89.94% |
| Aus | 67 | 95.52% | 4.48% |
| Indica I | 374 | 94.65% | 5.35% |
| Indica II | 213 | 98.59% | 1.41% |
| Indica Intermediate | 211 | 91.94% | 8.06% |
| Temperate Japonica | 335 | 2.09% | 97.91% |
| Tropical Japonica | 94 | 24.47% | 75.53% |
| Japonica Intermediate | 68 | 29.41% | 70.59% |
| Group VI/Aromatic | 14 | 21.43% | 78.57% |
| Intermediate | 42 | 61.90% | 38.10% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0826573277 | A->G | INTERGENIC | None |