Detailed information of SNP:
|
SNP ID:
sf0826632441(Gbrowse)
Chromosome: chr08 Position: 26632441 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1416 | 88.28% | 11.72% |
| All Indica | 796 | 83.67% | 16.33% |
| All Japonica | 497 | 99.60% | 0.40% |
| Aus | 67 | 52.24% | 47.76% |
| Indica I | 372 | 70.97% | 29.03% |
| Indica II | 213 | 99.06% | 0.94% |
| Indica Intermediate | 211 | 90.52% | 9.48% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 97.06% | 2.94% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0826632441 | A->G | INTERGENIC | None |