Detailed information of SNP:
|
SNP ID:
sf0826637035(Gbrowse)
Chromosome: chr08 Position: 26637035 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1401 | 86.87% | 13.13% |
| All Indica | 783 | 81.35% | 18.65% |
| All Japonica | 497 | 99.80% | 0.20% |
| Aus | 67 | 49.25% | 50.75% |
| Indica I | 372 | 69.35% | 30.65% |
| Indica II | 210 | 98.10% | 1.90% |
| Indica Intermediate | 201 | 86.07% | 13.93% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 98.94% | 1.06% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 40 | 95.00% | 5.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0826637035 | G->A | INTERGENIC | None |