Detailed information of SNP:
|
SNP ID:
sf0827148384(Gbrowse)
Chromosome: chr08 Position: 27148384 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1352 | 92.97% | 7.03% |
| All Indica | 733 | 87.18% | 12.82% |
| All Japonica | 497 | 99.80% | 0.20% |
| Aus | 66 | 100.00% | 0.00% |
| Indica I | 339 | 86.43% | 13.57% |
| Indica II | 204 | 96.57% | 3.43% |
| Indica Intermediate | 190 | 78.42% | 21.58% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0827148384 | G->A | INTERGENIC | None |