Detailed information of SNP:
|
SNP ID:
sf0828276751(Gbrowse)
Chromosome: chr08 Position: 28276751 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1257 | 96.74% | 3.26% |
| All Indica | 799 | 99.87% | 0.13% |
| All Japonica | 342 | 93.27% | 6.73% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 375 | 99.73% | 0.27% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 232 | 98.71% | 1.29% |
| Tropical Japonica | 69 | 82.61% | 17.39% |
| Japonica Intermediate | 41 | 80.49% | 19.51% |
| Group VI/Aromatic | 13 | 23.08% | 76.92% |
| Intermediate | 36 | 83.33% | 16.67% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0828276751 | G->A | INTERGENIC | None |