Detailed information of SNP:



SNP ID: sf0828390589(Gbrowse)

Chromosome: chr08

Position: 28390589
Major allele: A

Minor allele: G

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1417 96.19% 3.81%
All Indica799 99.87% 0.13%
All Japonica495 89.49% 10.51%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 99.53% 0.47%
Temperate Japonica335 99.10% 0.90%
Tropical Japonica92 51.09% 48.91%
Japonica Intermediate68 94.12% 5.88%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 97.62% 2.38%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0828390589 A->G INTERGENIC None