Detailed information of SNP:
|
SNP ID:
sf0900714492(Gbrowse)
Chromosome: chr09 Position: 714492 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1403 | 97.29% | 2.71% |
| All Indica | 799 | 99.62% | 0.38% |
| All Japonica | 482 | 92.95% | 7.05% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 99.47% | 0.53% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 99.53% | 0.47% |
| Temperate Japonica | 330 | 95.76% | 4.24% |
| Tropical Japonica | 85 | 90.59% | 9.41% |
| Japonica Intermediate | 67 | 82.09% | 17.91% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0900714492 | G->A | INTERGENIC | None |