Detailed information of SNP:



SNP ID: sf0907120871(Gbrowse)

Chromosome: chr09

Position: 7120871
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 99.08% 0.92%
All Indica799 100.00% 0.00%
All Japonica497 97.99% 2.01%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 90.43% 9.57%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 92.86% 7.14%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0907120871 G->A INTERGENIC None