Detailed information of SNP:



SNP ID: sf0907174571(Gbrowse)

Chromosome: chr09

Position: 7174571
Major allele: G

Minor allele: A

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1366 57.17% 42.83%
All Indica759 68.51% 31.49%
All Japonica496 35.89% 64.11%
Aus56 85.71% 14.29%
Indica I359 66.85% 33.15%
Indica II204 75.00% 25.00%
Indica Intermediate196 64.80% 35.20%
Temperate Japonica335 37.01% 62.99%
Tropical Japonica94 14.89% 85.11%
Japonica Intermediate67 59.70% 40.30%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 51.22% 48.78%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0907174571 A->G INTERGENIC None