Detailed information of SNP:



SNP ID: sf0907332374(Gbrowse)

Chromosome: chr09

Position: 7332374
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1418 93.58% 6.42%
All Indica798 89.10% 10.90%
All Japonica497 99.80% 0.20%
Aus67 100.00% 0.00%
Indica I374 82.09% 17.91%
Indica II213 96.71% 3.29%
Indica Intermediate211 93.84% 6.16%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 92.86% 7.14%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0907332374 C->T INTERGENIC None