Detailed information of SNP:
|
SNP ID:
sf0908236885(Gbrowse)
Chromosome: chr09 Position: 8236885 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1402 | 95.72% | 4.28% |
| All Indica | 784 | 92.73% | 7.27% |
| All Japonica | 495 | 99.60% | 0.40% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 364 | 90.93% | 9.07% |
| Indica II | 212 | 95.28% | 4.72% |
| Indica Intermediate | 208 | 93.27% | 6.73% |
| Temperate Japonica | 334 | 99.40% | 0.60% |
| Tropical Japonica | 93 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0908236885 | A->G | INTERGENIC | None |