Detailed information of SNP:
|
SNP ID:
sf0910350894(Gbrowse)
Chromosome: chr09 Position: 10350894 |
Major allele:
C
Minor allele: G Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of C(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1404 | 90.46% | 9.54% |
| All Indica | 799 | 100.00% | 0.00% |
| All Japonica | 483 | 73.08% | 26.92% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 211 | 100.00% | 0.00% |
| Temperate Japonica | 326 | 68.40% | 31.60% |
| Tropical Japonica | 90 | 95.56% | 4.44% |
| Japonica Intermediate | 67 | 65.67% | 34.33% |
| Group VI/Aromatic | 14 | 78.57% | 21.43% |
| Intermediate | 41 | 97.56% | 2.44% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0910350894 | C->G | INTERGENIC | None |