Detailed information of SNP:
|
SNP ID:
sf0910441885(Gbrowse)
Chromosome: chr09 Position: 10441885 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1391 | 96.05% | 3.95% |
| All Indica | 798 | 95.99% | 4.01% |
| All Japonica | 470 | 95.74% | 4.26% |
| Aus | 67 | 97.01% | 2.99% |
| Indica I | 375 | 95.47% | 4.53% |
| Indica II | 212 | 97.17% | 2.83% |
| Indica Intermediate | 211 | 95.73% | 4.27% |
| Temperate Japonica | 318 | 96.54% | 3.46% |
| Tropical Japonica | 85 | 90.59% | 9.41% |
| Japonica Intermediate | 67 | 98.51% | 1.49% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0910441885 | A->G | INTERGENIC | None |