Detailed information of SNP:
|
SNP ID:
sf0910775285(Gbrowse)
Chromosome: chr09 Position: 10775285 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1413 | 90.73% | 9.27% |
| All Indica | 797 | 91.97% | 8.03% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 64 | 9.38% | 90.62% |
| Indica I | 374 | 91.98% | 8.02% |
| Indica II | 212 | 91.98% | 8.02% |
| Indica Intermediate | 211 | 91.94% | 8.06% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 85.71% | 14.29% |
| Intermediate | 41 | 82.93% | 17.07% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0910775285 | G->A | INTERGENIC | None |