Detailed information of SNP:



SNP ID: sf0910821832(Gbrowse)

Chromosome: chr09

Position: 10821832
Major allele: C

Minor allele: A

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of A(minor allele)
All1415 59.22% 40.78%
All Indica796 91.71% 8.29%
All Japonica497 2.21% 97.79%
Aus67 97.01% 2.99%
Indica I374 86.63% 13.37%
Indica II213 97.18% 2.82%
Indica Intermediate209 95.22% 4.78%
Temperate Japonica335 2.99% 97.01%
Tropical Japonica94 1.06% 98.94%
Japonica Intermediate68 0.00% 100.00%
Group VI/Aromatic14 78.57% 21.43%
Intermediate41 51.22% 48.78%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0910821832 A->C INTERGENIC None