Detailed information of SNP:



SNP ID: sf0910826003(Gbrowse)

Chromosome: chr09

Position: 10826003
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 96.83% 3.17%
All Indica799 99.62% 0.38%
All Japonica497 92.76% 7.24%
Aus67 98.51% 1.49%
Indica I375 99.47% 0.53%
Indica II213 99.53% 0.47%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica335 92.84% 7.16%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 82.35% 17.65%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 88.10% 11.90%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0910826003 G->A INTERGENIC None