Detailed information of SNP:
|
SNP ID:
sf0914462141(Gbrowse)
Chromosome: chr09 Position: 14462141 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1416 | 80.30% | 19.70% |
| All Indica | 797 | 74.40% | 25.60% |
| All Japonica | 496 | 88.71% | 11.29% |
| Aus | 67 | 91.04% | 8.96% |
| Indica I | 374 | 67.91% | 32.09% |
| Indica II | 213 | 92.96% | 7.04% |
| Indica Intermediate | 210 | 67.14% | 32.86% |
| Temperate Japonica | 335 | 98.51% | 1.49% |
| Tropical Japonica | 93 | 55.91% | 44.09% |
| Japonica Intermediate | 68 | 85.29% | 14.71% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 69.05% | 30.95% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0914462141 | G->A | INTERGENIC | None |