Detailed information of SNP:
SNP ID:
sf0914656991(Gbrowse)
Chromosome: chr09 Position: 14656991 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
---|---|---|---|
All | 1419 | 90.06% | 9.94% |
All Indica | 799 | 95.87% | 4.13% |
All Japonica | 497 | 78.87% | 21.13% |
Aus | 67 | 100.00% | 0.00% |
Indica I | 375 | 98.40% | 1.60% |
Indica II | 213 | 96.24% | 3.76% |
Indica Intermediate | 211 | 91.00% | 9.00% |
Temperate Japonica | 335 | 69.85% | 30.15% |
Tropical Japonica | 94 | 100.00% | 0.00% |
Japonica Intermediate | 68 | 94.12% | 5.88% |
Group VI/Aromatic | 14 | 100.00% | 0.00% |
Intermediate | 42 | 92.86% | 7.14% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0914656991 | G->A | INTERGENIC | None |