Detailed information of SNP:
|
SNP ID:
sf0915043790(Gbrowse)
Chromosome: chr09 Position: 15043790 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1403 | 97.86% | 2.14% |
| All Indica | 789 | 97.08% | 2.92% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 61 | 88.52% | 11.48% |
| Indica I | 374 | 97.06% | 2.94% |
| Indica II | 209 | 98.09% | 1.91% |
| Indica Intermediate | 206 | 96.12% | 3.88% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0915043790 | G->A | INTERGENIC | None |